There are several free tools that a security engineer may use as part of their arsenal but the following three are quite essential.

- Burp Suite by Portswigger
The community edition of the Burp Suite is a free tool that provides a comprehensive solution for web application security checks. Their proxy feature is quite useful during penetration testing to manually inspect and fiddle with web traffic. It also includes a scanner that provides automated vulnerability scans for web applications.
- Security Monkey by Netflix
Security Monkey is a tool that monitors your AWS and GCP accounts for policy changes and alerts on insecure configurations. Managing the configurations and policies on cloud provides like AWS is a complex task and requires constant monitoring. Security Monkey helps automate the process and has good integration with developer workflow tools like JIRA to create tickets and bug reports.
- ModSecurity by Trustwave
ModSecurity is a web application firewall (WAF), it enables real time logging, monitoring and access control. It also comes with a powerful rules language and API to enable you to define and implement custom protections.